PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168897.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 222aa    MW: 24910 Da    PI: 6.4011
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-18129179255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g++ AeIrd      k +r++lg+f+ta++Aa a+++a+++++g
  XP_019168897.1 129 HYRGVRRRP-WGKYGAEIRDS---SrKGARVWLGTFDTAKDAAMAYDKAALRIRG 179
                     8********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MDGEREQQQV ASEAILENVW ANFIAKGEAE GNGKENWEQL PNLDGGDVSS MEKVLLQRLP  60
SLGRWISMGA EAWEQLLDGI VVPCNDNKLV SNMVSEHDFK HHEELSSCSS STCNGELEKR  120
VEKKVVEKHY RGVRRRPWGK YGAEIRDSSR KGARVWLGTF DTAKDAAMAY DKAALRIRGP  180
KAHLNFPFKT VTKALEISCL PEINNDSQGS YHEHGEITCN PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.12e-32ERF family protein