PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019169044.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 194aa MW: 21858 Da PI: 9.4434

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019169044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.4	5.2e-32	115	173	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vk+s +prsYYrCt+++C+vkk+++r ++d ++v++tYeg Hnh+ XP_019169044.1 115 LDDGFKWRKYGQKSVKNSAHPRSYYRCTHHTCNVKKQIQRLSKDRSIVVTTYEGIHNHP 173 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MEGDEPPPPP PQLISNANDL PPQLFSFPST SSLQAPPPYS LLSPLLPPTM QSSAQLGPEI 60 DWVGLLSGCM DQTTQAQVVL SENGNKSKGK LVQNGKKKNF PPRIEFHTRS SEDILDDGFK 120 WRKYGQKSVK NSAHPRSYYR CTHHTCNVKK QIQRLSKDRS IVVTTYEGIH NHPCEKLMET 180 LSPLLKQLHF LPRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64000.1	1e-56	WRKY family protein