PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019169099.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WOX

Protein Properties

Length: 307aa MW: 33568.6 Da PI: 9.3857

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019169099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55	1.4e-17	55	114	2	56
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 + R+++++eq+++Le+ F++ +p +ee++ + +kl ++ +++V++WFqNr+ + k XP_019169099.1 55 KARWNPKPEQIRILEAIFNSgMVNPPREEIRNIRAKLqeygQVGDANVFYWFQNRKSRTK 114 89***************99***********************************99 PP
2	Wus_type_Homeobox	110.5	9.2e-36	54	116	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P++eei++i+a+L+eyG+++d+NVfyWFQNrk+R ++k XP_019169099.1 54 PKARWNPKPEQIRILEAIFNSGMVNPPREEIRNIRAKLQEYGQVGDANVFYWFQNRKSRTKHK 116 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MSSSKRHWPS MFKSKPCNTL HPWHRHRDIL NSSLKPPSTP PSGGGSEERS APEPKARWNP 60 KPEQIRILEA IFNSGMVNPP REEIRNIRAK LQEYGQVGDA NVFYWFQNRK SRTKHKLRHL 120 QTSTKSPPPP QQNPTPPLIP GPSPSSSSSS SDKSSPNDSA NHRHSFFHAR NELLTQPPSI 180 HQTSTGFASS DGGAFTQTLC FPAVSTVSDQ TTVVENSPNL LITELMGFAA AVPPPSTCGG 240 VTGPAKSTVF INDLAFEVAA AHLNVKAAFG DDAVLIHYSS GQPLLTNEWG LTLDPLQDGA 300 YYYLVRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45980.1	5e-59	WOX family protein