PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019169359.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 986aa MW: 108206 Da PI: 5.4646

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019169359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.3	7.4e-29	577	628	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_019169359.1 577 AEKTISLDVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 628 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 986 aa Download sequence
MSEPDDETPK SKEFFSPPRP PPEREPLMMM DLDLDASWTF EQIFAAAASN PNSPFVLSGS 60 EQPFSPLWGF PDDNDDRTAE NAAVGSFRLS DCQRLPPYAG DPDSVIEGVP GQDEKRRLPP 120 PFLGLTTKDY LDGSCIIKER MTQALRYFKE STGERVLAQV WAPVKNGGRY ILTTSGQPFV 180 LDPNTNGLHQ YRMVSLMYSF SVDGETDGVL GLPGRVFRRK VPEWTPNVQY YSIKEFPRLN 240 HALNYNVQGT VALPVFEPSG QSCIGVLELI MTSQKVNYAP EVDKVCKALE AVNLKSSEIL 300 DHPSIQICNE GRQHALVEIL EILTVVCETY KLPLAQTWVP CRHRNVLADG GGLKKSCSSF 360 DGSCMGQVCM STTDVAFYVV DAHMWGFREA CAEHHLQKGQ GVAGRAFASQ RSCYCEDITQ 420 FCKTEYPLVH YARMFGLASC FAICLRSTHT GNDDYIMEFF LPPNGGDYSD QHALLDSLLL 480 TLKNHFKSLR VASGNLLEHE WGSVEIINAS VEKKHDLMTE TNCFSPPQPD SLENKQLTPG 540 QNTPNGGTLS EPPEAQNRAT VAVKIEGGKK EKKRGKAEKT ISLDVLQQYF AGSLKDAAKS 600 LGVCPTTMKR ICRQHGISRW PSRKINKVNR SLTKLKRVIE SVQGADGAPF TLSTIAPNSV 660 PVGVGSISWP ATAIESNCQN SPPSRPSESP EGKSEFLNHR ELGSHDQAEP SNQILEGQVL 720 GNHELPHQQN GFAVGEGSNR SRTGSGSREE SIGTPTSHGS CQGSPSPGNE PSPQNELVVS 780 PTRDPAMETP NTLGIIACQP AREINLSAAF ASLDALVAEQ FQKPFGGMLV EDAGSSHDLR 840 NLCQAGEAQF DERMPEHSLT HPPRSDAIPI DHITIAAERV PQHPARPEVT SITIKATYGE 900 DIIRFRLPLG SGIVKLQEEV AKRLKLELGT FEIKYLDDDH EWVLIACDAD LQECVDISRS 960 SGGNITRLLI HDIMPHLGSS CESSGE

Sequence ? help Back to Top

Protein Sequence Length: 986 aa Download sequence

MSEPDDETPK SKEFFSPPRP PPEREPLMMM DLDLDASWTF EQIFAAAASN PNSPFVLSGS  60
EQPFSPLWGF PDDNDDRTAE NAAVGSFRLS DCQRLPPYAG DPDSVIEGVP GQDEKRRLPP  120
PFLGLTTKDY LDGSCIIKER MTQALRYFKE STGERVLAQV WAPVKNGGRY ILTTSGQPFV  180
LDPNTNGLHQ YRMVSLMYSF SVDGETDGVL GLPGRVFRRK VPEWTPNVQY YSIKEFPRLN  240
HALNYNVQGT VALPVFEPSG QSCIGVLELI MTSQKVNYAP EVDKVCKALE AVNLKSSEIL  300
DHPSIQICNE GRQHALVEIL EILTVVCETY KLPLAQTWVP CRHRNVLADG GGLKKSCSSF  360
DGSCMGQVCM STTDVAFYVV DAHMWGFREA CAEHHLQKGQ GVAGRAFASQ RSCYCEDITQ  420
FCKTEYPLVH YARMFGLASC FAICLRSTHT GNDDYIMEFF LPPNGGDYSD QHALLDSLLL  480
TLKNHFKSLR VASGNLLEHE WGSVEIINAS VEKKHDLMTE TNCFSPPQPD SLENKQLTPG  540
QNTPNGGTLS EPPEAQNRAT VAVKIEGGKK EKKRGKAEKT ISLDVLQQYF AGSLKDAAKS  600
LGVCPTTMKR ICRQHGISRW PSRKINKVNR SLTKLKRVIE SVQGADGAPF TLSTIAPNSV  660
PVGVGSISWP ATAIESNCQN SPPSRPSESP EGKSEFLNHR ELGSHDQAEP SNQILEGQVL  720
GNHELPHQQN GFAVGEGSNR SRTGSGSREE SIGTPTSHGS CQGSPSPGNE PSPQNELVVS  780
PTRDPAMETP NTLGIIACQP AREINLSAAF ASLDALVAEQ FQKPFGGMLV EDAGSSHDLR  840
NLCQAGEAQF DERMPEHSLT HPPRSDAIPI DHITIAAERV PQHPARPEVT SITIKATYGE  900
DIIRFRLPLG SGIVKLQEEV AKRLKLELGT FEIKYLDDDH EWVLIACDAD LQECVDISRS  960
SGGNITRLLI HDIMPHLGSS CESSGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein