PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019169539.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 237aa    MW: 26349.2 Da    PI: 6.6813
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019169539.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.6e-1082128554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + +rE+ RR r+N++f+eL  ++ +    + +K++K++iL  Av+ + +L
  XP_019169539.1  82 KAQREKMRRYRLNDRFQELSCVMDPG---KPPKMDKSAILSDAVRMVLQL 128
                     678****************7555555...9999*************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MAAPEVDGSN WLLDLGFEDI PLPGGKFPPL EPGYQWHSSA ILSPAPPSIR QDESYVKFDV  60
SNGCSARKRM KSGACSGAAD SKAQREKMRR YRLNDRFQEL SCVMDPGKPP KMDKSAILSD  120
AVRMVLQLRD EAQKLKESFE DLQEQVNELK AEKNELKDEK QKLKEEKDKL ELQLKALNSR  180
PGFLPHPPAT AVPFPTPHHL VGGKLVPFVG YPGIPMWQFA APAVIDTPED HSLPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51070.11e-46bHLH family protein