PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019169764.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 199aa MW: 22632.1 Da PI: 4.8224

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019169764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	120.1	2e-37	8	130	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deelvv++L++k++ +++ +vi+++d+y ++PwdL+ k+ ae ++wyf+s+r + +r+t++g+Wk g d++++s+ XP_019169764.1 8 LPPGFRFYPSDEELVVHFLHRKAALLPCHP-DVIPDLDLYPYDPWDLDGKAMAEGRKWYFYSRRTS--------RRMTENGFWKPLGVDEPIFSS 93 79***********************999.99**********977778899**9854........789*************9 PP NAM 96 ....kgelvglkktLvfykgrapkgektdWvmheyrl 128 g++vg+kk +fy g+ p+g ktdWvm+eyrl XP_019169764.1 94 sgggAGQKVGMKKYYAFYVGEPPEGDKTDWVMQEYRL 130 99888899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MGDNNVNLPP GFRFYPSDEE LVVHFLHRKA ALLPCHPDVI PDLDLYPYDP WDLDGKAMAE 60 GRKWYFYSRR TSRRMTENGF WKPLGVDEPI FSSSGGGAGQ KVGMKKYYAF YVGEPPEGDK 120 TDWVMQEYRL SDYSASTSSR SSSRRSSRHS KIDYSKWVIC RVFEGNYDNG GGGDDGTELS 180 CLDEVFLSLD DLDEISLPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	6e-65	NAC family protein