PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019169959.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 455aa MW: 49813 Da PI: 7.3548

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019169959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.2e-30	240	299	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_019169959.1 240 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDRSILITTYEGTHNHP 299 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MDNNNNYNID LSLNLNESRR RPRSSEQELS EPGKMLQSNA AEGEISTGSS LSENQKTEEL 60 SVLQREMKRM KEENKALRDA VEQTMKDFHD LHQKFSSIQQ NNHEHKEFAK DFLTLSGADE 120 TRNHRELHGR SQITSDPSPE DGGDENSDGD GELGLSLTLK SSSSSSSSLI GRRLMHGEGE 180 ERGEKSKAEE MNSTTGFTPT PPPPAAMIQS NPPPGFTAAT SPPNKKTRVS VRARCEAATM 240 NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CLEDRSILIT TYEGTHNHPL 300 PVGATAMAST ASAASLMLLQ DSTNPISNLN HAFLIPNYNH NPHLIINPNN PSSHLNNIPN 360 LVRNNSIINP TTIPASNPSS SSSSPHYWGP KLPDHHHHRQ IELRSNGGDR TGDSTNKNDH 420 QNMSAAIAAD PKFRVAVAAA LSSLIGTKDQ SHASS

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MDNNNNYNID LSLNLNESRR RPRSSEQELS EPGKMLQSNA AEGEISTGSS LSENQKTEEL  60
SVLQREMKRM KEENKALRDA VEQTMKDFHD LHQKFSSIQQ NNHEHKEFAK DFLTLSGADE  120
TRNHRELHGR SQITSDPSPE DGGDENSDGD GELGLSLTLK SSSSSSSSLI GRRLMHGEGE  180
ERGEKSKAEE MNSTTGFTPT PPPPAAMIQS NPPPGFTAAT SPPNKKTRVS VRARCEAATM  240
NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CLEDRSILIT TYEGTHNHPL  300
PVGATAMAST ASAASLMLLQ DSTNPISNLN HAFLIPNYNH NPHLIINPNN PSSHLNNIPN  360
LVRNNSIINP TTIPASNPSS SSSSPHYWGP KLPDHHHHRQ IELRSNGGDR TGDSTNKNDH  420
QNMSAAIAAD PKFRVAVAAA LSSLIGTKDQ SHASS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	8e-53	WRKY family protein