PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019170036.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 303aa    MW: 33154.4 Da    PI: 6.1119
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019170036.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.12.4e-3080138259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp+kk+vers+ dp+++++tY+ eHnh+
  XP_019170036.1  80 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPAKKQVERSRVDPNMLVVTYSCEHNHP 138
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MDGRFSHQPP FANDQDDSEN SPENSADSPR SGMFHDTKMA SINSPKRSSS RRAIQKRVVS  60
VPISDVEGSK LKGEISFPPS DSWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CPAKKQVERS  120
RVDPNMLVVT YSCEHNHPWP AARNNHVHRN AVTLTAAAAA PTTRSSSKAT TSSKAAAAAV  180
SDSEDGREAE ASDFSAQPEP ETSDKFAGLG DSSSVIYSDE FGWFSSFEPT TSTVIESTSI  240
LTEARVTHAD MSVIFSMREE EGEESPFAGL GELPECSREF GIGMMERDEA RRRHNLTPWC  300
GTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.17e-62WRKY family protein