PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019170254.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 354aa    MW: 37941.8 Da    PI: 8.6686
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019170254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.73e-3961121262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     +++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ +
  XP_019170254.1  61 NQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIK 121
                     57899*****************************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MVGSNCDEKM AVISSTANEW PLHHHQKNQI DGRSLMGSSG ARVMEKPMNG QDQALPPPPP  60
NQQALKCPRC DSSNTKFCYY NNYSLSQPRH FCKACKRYWT RGGTLRNVPV GGGCRKNKRI  120
KRPSAAPPSA SSSATHDHHI SASSSSTPNL QVQAQMDHHI NPLLYGLPTS TPSELGLSFP  180
RLFSSRVSNF EGTISGYDHH HHHMGLGFSS SSPSGLLGGE NGFANNTSNN SLLSSYHGGS  240
SSSSTSTLAS LIASSLHQGA NNNGFHGLSP YGEMQVGSGN MGSGEMPKEV KMEGDGQNRL  300
SNWNNNNGLS SHYQIMNQTG QINTSSSDNP SLPWNNGGSW FDPSNIGSSV PSIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.23e-35Dof family protein