PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019170344.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YA
Protein Properties Length: 207aa    MW: 23014.5 Da    PI: 9.1994
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019170344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.31.1e-32114170158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq+Rak+e+e+kl  k+rkpylheSRh hAlrR+Rg+gGrF
  XP_019170344.1 114 EEPVFVNAKQYHGILRRRQSRAKAESENKL-LKARKPYLHESRHLHALRRARGCGGRF 170
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MTSSSVHELS DNSETEQQQK HSEHEIQSSS PSNLMPHSAT IAPAMHYGIP PQNGNGNAMA  60
HTVYPYPDPY YRSIFAPYDA QPYAAQPYPS QPMVHLQLMG TQQAGVPLPS DAVEEPVFVN  120
AKQYHGILRR RQSRAKAESE NKLLKARKPY LHESRHLHAL RRARGCGGRF TSKKNEKQQK  180
QEGSGHKSPP NVNLNSESSD NGSEFAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.25e-63NF-YA family protein