PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019170409.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 349aa    MW: 39144.4 Da    PI: 5.7826
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019170409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.76.8e-30131191259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs++dp+v++itY+g H+++
  XP_019170409.1 131 EDGYSWRKYGQKDILGAKYPRSYYRCTFRlmhNCWATKQVQRSDDDPTVFDITYKGAHTCN 191
                     8**************************99999***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MDSAYNGEYK ALLNELIQGM ECAKQLRVHL NSAASSETQY FFVQRILSSY EKALLILKWR  60
LVGQSHPVPP LPGAPESSMS LDGSLDINNN NNNSFKEEQQ DYNVSKKRKA MPTWTEQVRV  120
GAENGLEGPT EDGYSWRKYG QKDILGAKYP RSYYRCTFRL MHNCWATKQV QRSDDDPTVF  180
DITYKGAHTC NLAPTTSVPP LRSPENQQLE QIHHQNESLQ AMQSNQMLMN LRANLRVSTD  240
GLDTKETAFP FSFPPTFSGL TDENQHFQSS QVDDNAVALG TYSLSFVSPT TPDSNYFSAS  300
QQHTNAFKGV HISSANTSST NSPIVGLDYS LHPATLDPNF PFDTLEFLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.13e-63WRKY family protein