PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019170415.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 143aa    MW: 16542.1 Da    PI: 8.4723
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019170415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.85e-10501171484
                     T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
              B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                     + l++p++ +++++++   + t+tl+d  gr+W  ++i+++ + r++l++GW++ ++ n +   D ++ ++
  XP_019170415.1  50 ASLYIPREIIKDFNLE--LPPTVTLRDMIGREWIANVIVWGDG-RTWLSGGWRNLCNLNLVGKEDRCICEF 117
                     679*******999776..6779***************999996.779******************999884 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MAQTSGSKRD ASVKKSNIPD YFGADLFLSG RYIQPENPYF VTKIRRTRVA SLYIPREIIK  60
DFNLELPPTV TLRDMIGREW IANVIVWGDG RTWLSGGWRN LCNLNLVGKE DRCICEFLPL  120
QMENNMVLQV TIVREDDAMQ MRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.12e-07B3 family protein