PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019170446.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WOX

Protein Properties

Length: 167aa MW: 19336.8 Da PI: 10.5505

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019170446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	47	4.3e-15	55	114	2	56
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 + R++++ eq+++Le+ F++ +p +ee++ +kl ++ +++V++WFqNr+ + k XP_019170446.1 55 KARWNPKMEQVHILEAIFNSgMVNPPKEEIRNSKTKLqdygQVRDANVFYWFQNRKSRTK 114 89***************99***********************************99 PP
2	Wus_type_Homeobox	102.5	3e-33	54	116	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+ eQ++iLe++++sG+++P+keei++ +++L+ yG+++d+NVfyWFQNrk+R ++k XP_019170446.1 54 PKARWNPKMEQVHILEAIFNSGMVNPPKEEIRNSKTKLQDYGQVRDANVFYWFQNRKSRTKHK 116 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MSSSKRHWLS MFKSKPCNTL HPWHRHRHIL NSSLKPPSTA PSGGASEERS ATEPKARWNP 60 KMEQVHILEA IFNSGMVNPP KEEIRNSKTK LQDYGQVRDA NVFYWFQNRK SRTKHKLRYV 120 QTSTKSLPPV WLVSSLHGST TIIAGFGFDQ LREIDTQIHQ HHEEESN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	4e-45	WOX family protein