PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019170619.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 250aa MW: 28909.8 Da PI: 9.3542

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019170619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85.1	7e-27	20	71	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt eLHe+Fv+av+qLG +AtPk+++++m++ gL+l+h+kSHLQkYR XP_019170619.1 20 KPRLKWTAELHEAFVDAVQQLG---EATPKSLMKAMNIRGLSLYHLKSHLQKYRH 71 79*****************4...79*************************6 PP
2	Myb_DNA-binding	60.7	3e-19	22	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e +vdav+qlG t+k+ ++ m+ g++l+++ks++qky+ XP_019170619.1 22 RLKWTAELHEAFVDAVQQLGEATPKSLMKAMNiRGLSLYHLKSHLQKYR 70 89**********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MAPQSVQGNA MSLVLSREAK PRLKWTAELH EAFVDAVQQL GEATPKSLMK AMNIRGLSLY 60 HLKSHLQKYR HGKSHQSRHS CHTRQQGKRA DYSEPRDQRS VAMQTQKNEK LQIDQALQVQ 120 MEVQKKIHEQ IEVQRHLQLR IEAQGKYLQS ALKKAQEILS KADLISLLIS PTMVDLGCQS 180 SSENSELTTM ESCEEREERR YDKRFRGRRY DETLKSSSGF LENLDLNVKS TVNKFDDTDC 240 KVIDLNREWV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	8e-53	G2-like family protein