PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019170620.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 249aa MW: 28739.6 Da PI: 9.1253

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019170620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.6	1e-31	20	74	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt eLHe+Fv+av+qLGG++kAtPk+++++m++ gL+l+h+kSHLQkYR XP_019170620.1 20 KPRLKWTAELHEAFVDAVQQLGGADKATPKSLMKAMNIRGLSLYHLKSHLQKYRH 74 79****************************************************6 PP
2	Myb_DNA-binding	59	1e-18	22	73	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e +vdav+qlGg t+k+ ++ m+ g++l+++ks++qky+ XP_019170620.1 22 RLKWTAELHEAFVDAVQQLGGAdkaTPKSLMKAMNiRGLSLYHLKSHLQKYR 73 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MAPQSVQGNA MSLVLSREAK PRLKWTAELH EAFVDAVQQL GGADKATPKS LMKAMNIRGL 60 SLYHLKSHLQ KYRHGKSHQS RHSCHTRQQD YSEPRDQRSV AMQTQKNEKL QIDQALQVQM 120 EVQKKIHEQI EVQRHLQLRI EAQGKYLQSA LKKAQEILSK ADLISLLISP TMVDLGCQSS 180 SENSELTTME SCEEREERRY DKRFRGRRYD ETLKSSSGFL ENLDLNVKST VNKFDDTDCK 240 VIDLNREWV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	1e-57	G2-like family protein