PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019171326.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HSF
Protein Properties Length: 431aa    MW: 48826.6 Da    PI: 4.4102
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019171326.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind105.25.2e-33141142103
                     HHHHHHHHHCTGGGTTTSEESSSS........SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS
    HSF_DNA-bind   2 Flkklyeiledeelkeliswseng........nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 
                     Fl k ye+++de+++ lisws+++        +sf+++d ++f +++LpkyFkhsnf+SFvRQLn+YgF+kv++++         weF++++F +
  XP_019171326.1  14 FLLKCYEMVDDESTDALISWSQSQpstadgnnDSFIIWDVSNFCSQLLPKYFKHSNFSSFVRQLNIYGFRKVDTDR---------WEFANDKFVR 99 
                     9********************766667777779*****************************************99.........********** PP

                     XXXXXXXXXXXXXXX CS
    HSF_DNA-bind  89 gkkellekikrkkse 103
                     g+k+ll +i r+k++
  XP_019171326.1 100 GQKHLLASIVRRKNS 114
                     ************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MVKSVENGVS VPPFLLKCYE MVDDESTDAL ISWSQSQPST ADGNNDSFII WDVSNFCSQL  60
LPKYFKHSNF SSFVRQLNIY GFRKVDTDRW EFANDKFVRG QKHLLASIVR RKNSQNVVPK  120
ITTQQEVTKS STTEDDKRLA LWKEVESLKI DKNALMQELI KLRQHQQTSQ SRLLLLREQV  180
KGMEKNQQQM LSFIVMAMQN PGFLLQFLQP KEYNWLMAET GSNVLSKVDD KCELAPSNGM  240
MVKYQPPLQH QVAEPICSDP TSDPEKSMEH DFSSNDIEEN EETGRNNASS EEVEHNSELT  300
PSNGILVKYQ SPTHQVAVPK CIEPTSYAEK STDLDFSLDD IKDLFKNIDI FPGPFDEGFL  360
PSENSDPFSI PDMLDGDDVM DMLLSSPISE REELEDGIGE GGTTETPPHT THAGNFEGMD  420
TLTEQMGHTK F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.15e-76HSF family protein