PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019171588.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 198aa    MW: 21648.3 Da    PI: 7.7232
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019171588.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.45.3e-131061255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                    r+  + +Er+RR++++  +++L +l+P++   +s+  ls  + L +Av YIk+Lq
  XP_019171588.1 10 RADRKTVERNRRNQMKALYSTLNSLVPHQ---QSTEmLSLPDQLDEAVSYIKKLQ 61
                    667789**********************9...89999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MDEQNRNPSR ADRKTVERNR RNQMKALYST LNSLVPHQQS TEMLSLPDQL DEAVSYIKKL  60
QIKLERMKEK KESLRGGCSS HDHQSSSIAA SRSSNGGGGM AAAVGGLKLP HVDIHHVDSA  120
VEVVLITGGG GVDCSQSSMF NDVLRMLHEE GADIISASFS SLDNMVFHTI HSQIEKSGCA  180
YKAQRISERL HSFVNGAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-37bHLH family protein