PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019171608.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 197aa    MW: 22294.6 Da    PI: 4.8008
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019171608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM114.51.1e-3581281128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk.dkevls 94 
                     lppGfrF Ptdeelvv++L++k++  +++  +vi+++d+y ++PwdL+ ++ +e ++wyf+s+r          +r+t++gyWka g  d++++s
  XP_019171608.1   8 LPPGFRFYPTDEELVVHFLHRKAALLPCHP-DVIPDLDLYPYDPWDLEGRAMGEGNKWYFYSRRTA--------SRITSNGYWKALGGgDEPIFS 93 
                     79*************************999.99**************977778899******9854........799*******98765999*99 PP

             NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +++ vg+k+  +fy g+ p+g kt+Wvm+eyrl
  XP_019171608.1  94 SsGSHRVGVKRYYAFYIGEPPQGDKTSWVMQEYRL 128
                     867888***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MGENSVNLPP GFRFYPTDEE LVVHFLHRKA ALLPCHPDVI PDLDLYPYDP WDLEGRAMGE  60
GNKWYFYSRR TASRITSNGY WKALGGGDEP IFSSSGSHRV GVKRYYAFYI GEPPQGDKTS  120
WVMQEYRLSD SASASTSSAK SSSSRRRTHS KNDYSKWVIC RVYDGNCDDD GDDGNELSCL  180
DEVFLSLDDL DEISLPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.19e-67NAC family protein