PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019171617.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 245aa MW: 26899.8 Da PI: 5.6896

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019171617.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.3	9.4e-25	41	94	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr +Wtp+LH+rF+eav+ LGG e AtP+tile+m+ k Ltl+ v+SHLQ +R XP_019171617.1 41 PRFKWTPDLHRRFLEAVQFLGGLECATPRTILEVMDEKELTLNRVRSHLQIHRA 94 89************************************************9996 PP
2	Myb_DNA-binding	37.5	5.3e-12	44	90	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 +WT++++ ++++av+ lGg t++tI + m k +tl+ ++s++q XP_019171617.1 44 KWTPDLHRRFLEAVQFLGGLecaTPRTILEVMDeKELTLNRVRSHLQ 90 7***************88************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MAENVFPSSS SSSLSVQGTI EGGQSSSCPE NPTGTRLIYP PRFKWTPDLH RRFLEAVQFL 60 GGLECATPRT ILEVMDEKEL TLNRVRSHLQ IHRANCFDPE QLAIETQAAL AQLAWAASLP 120 YPYGYPPLYS ASPPPPAALY SLPLWPQLPS PPARLYIGPV GPMPPTIPPS MRMMEYSAPA 180 APKTIIFKKL FPKGRPVPID VDETPELMMA GDHINSRPSS SAAREEGQDD DPLDLTLSIR 240 PPSCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-16	G2-like family protein