PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019171769.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 561aa MW: 60403.1 Da PI: 6.9936

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019171769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2e-30	301	359	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_019171769.1 301 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvACPVRKQVQRCAEDRSILTTTYEGTHNHP 359 7**************************9**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MDNGWGITLN NLIFKNGLGS SRPRFDTANM FPVSLNRKDD GERRQQAVLN EVDFFSEKKK 60 PAAVDSGFVV KKEISNDEPP IRTDLNINTG LQLVTANTGS DESTIDDGVS SDMEERRGKD 120 EVAGLQAELE RMNGENQRLK GMLTEVTNNY TALQMHLAAL MQQKQQQQQK NSMAESEVVD 180 RKSEEKKYEK EGSTVPRQFL DLGPSGVTAA EQTDEPTHSP TTSSEEKTIS ASPRNNNVDS 240 SKHKRSAREE SPDLESWNPN KAPKSISSSS RPVDDNQAST DATMRKARVS VRARSEAPMI 300 SDGCQWRKYG QKMAKGNPCP RAYYRCTMAV ACPVRKQVQR CAEDRSILTT TYEGTHNHPL 360 PPAAMAMAST TSAAANMLLS GSMPSGDVMM NPNFLARAIL PCSSSVATIS ASAPFPTVTL 420 DLTQTPNSVP NYPRLPPSQF PGGGGGGPYS LPSFAVTPAQ VFGQGLYSHS QSKFSGLQVS 480 HEAQNPLLPP PQPHPCLSDT LSAATAAITA DPNFTAALAA AISSILNGSQ PNIVNSTNNN 540 TTATANASNS NPTNNSNNKT H

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MDNGWGITLN NLIFKNGLGS SRPRFDTANM FPVSLNRKDD GERRQQAVLN EVDFFSEKKK  60
PAAVDSGFVV KKEISNDEPP IRTDLNINTG LQLVTANTGS DESTIDDGVS SDMEERRGKD  120
EVAGLQAELE RMNGENQRLK GMLTEVTNNY TALQMHLAAL MQQKQQQQQK NSMAESEVVD  180
RKSEEKKYEK EGSTVPRQFL DLGPSGVTAA EQTDEPTHSP TTSSEEKTIS ASPRNNNVDS  240
SKHKRSAREE SPDLESWNPN KAPKSISSSS RPVDDNQAST DATMRKARVS VRARSEAPMI  300
SDGCQWRKYG QKMAKGNPCP RAYYRCTMAV ACPVRKQVQR CAEDRSILTT TYEGTHNHPL  360
PPAAMAMAST TSAAANMLLS GSMPSGDVMM NPNFLARAIL PCSSSVATIS ASAPFPTVTL  420
DLTQTPNSVP NYPRLPPSQF PGGGGGGPYS LPSFAVTPAQ VFGQGLYSHS QSKFSGLQVS  480
HEAQNPLLPP PQPHPCLSDT LSAATAAITA DPNFTAALAA AISSILNGSQ PNIVNSTNNN  540
TTATANASNS NPTNNSNNKT H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-122	WRKY family protein