PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019172397.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 219aa    MW: 25430 Da    PI: 7.822
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019172397.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.41.9e-061865655
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    + +E++RR+++++ +  L +llP+ +   +++ +   + + ++v+YI+ Lq
  XP_019172397.1 18 KYVEKNRRNQLKTLYKHLFSLLPPhL---SQEGMALHDQVDETVKYIRWLQ 65
                    568*********************55...55559999**********9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MKKMASRLPK TSPKLERKYV EKNRRNQLKT LYKHLFSLLP PHLSQEGMAL HDQVDETVKY  60
IRWLQNEVEK NKQKKEELQK MMMMMNSSSR KRPHYSSCDD HRSSPLIQVL DIGPGTHVVL  120
VNDLEGVAGF HNIIRILHQH GLEVANATFQ QHGNSMLQVV HQQGFGGTML SEKLKQVLYG  180
SSCPEETTEQ QSSDSWEDYD IWGFHSLEPF QELQYPPPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-15bHLH family protein