PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019172670.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 261aa    MW: 28126.3 Da    PI: 5.8552
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019172670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.7e-3073130359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY+++Hnh+
  XP_019172670.1  73 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTMLLITYSSDHNHP 130
                     99************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MMETRLHQKQ EELSAGTPPP ENGVESPLSG DEAAEVSTPS PRKRRGAQKR VVSMPAGDGD  60
GSRSKSEVYP PPDSWSWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSRLDPTMLL  120
ITYSSDHNHP LPTKTHHHYA AAAAATTTTS AATTPTDSAA DHPGSPKPEL AIFADPDPEN  180
NSFPELAAGE MGWFSDVGSC CFMESAAFAA GPTVCHDTDV ALTLPIREED QSLFGDLGEL  240
PECSVVFRRC RVETPCFAGT G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.21e-64WRKY family protein