PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019173043.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 149aa    MW: 16669.3 Da    PI: 10.8876
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019173043.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.59.3e-1846367127
             NAM  67 kyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                     + ++g ++nr t +gyWka g+ + ++s ++e +g k+t++fy+grap+g+kt+W m ey+
  XP_019173043.1   4 NISRGGKPNRLTPEGYWKAAGTPTLIYS-NNEIIGGKRTMIFYRGRAPTGRKTEWKMIEYK 63 
                     4567999*********************.999****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MQENISRGGK PNRLTPEGYW KAAGTPTLIY SNNEIIGGKR TMIFYRGRAP TGRKTEWKMI  60
EYKAILGQPP PTATMSDVQL RHEFIRRRGL TADSTGRPYV RPSCHCCPSS CRAAISTPAN  120
CTRNHSGAVI FLPSAGCPRI RRRFIIFAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.23e-23NAC family protein