PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019173094.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 350aa MW: 37226.9 Da PI: 6.4098

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019173094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	77.4	1.7e-24	251	313	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN++L++el++l++e+ kl+se+ XP_019173094.1 251 ERELKRQKRKQSNRESARRSRLRKQAECEELQHRVETLSGENRSLRDELQRLSEECVKLTSEN 313 89**********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MGSGDDGTPT KPSKPASTQE TPAIPSYPDW ANPMQAYYGA GATPPFFAST VASPTPHPYL 60 WGSQHPLMPP YGTPVPYPAL YPPGGVYAHP NMTMAPSIVQ ANAESDAKAS EGKEKASGKK 120 PKGSSSGKAG DSKKAASSSG NDGATQSAES GSDGSSDASD ENNNHEFSAS KKGSFDQMLA 180 NGTHAKATNF QTSVPGNPAM SLPATNLNIG MDLWNPSSAG PGAIKMQSNP TGVSPVGREG 240 MMSDQWIQQD ERELKRQKRK QSNRESARRS RLRKQAECEE LQHRVETLSG ENRSLRDELQ 300 RLSEECVKLT SENDSIKEEL TRLCGPDAIP KLENNGVTAH IQAKPDEGNS

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MGSGDDGTPT KPSKPASTQE TPAIPSYPDW ANPMQAYYGA GATPPFFAST VASPTPHPYL  60
WGSQHPLMPP YGTPVPYPAL YPPGGVYAHP NMTMAPSIVQ ANAESDAKAS EGKEKASGKK  120
PKGSSSGKAG DSKKAASSSG NDGATQSAES GSDGSSDASD ENNNHEFSAS KKGSFDQMLA  180
NGTHAKATNF QTSVPGNPAM SLPATNLNIG MDLWNPSSAG PGAIKMQSNP TGVSPVGREG  240
MMSDQWIQQD ERELKRQKRK QSNRESARRS RLRKQAECEE LQHRVETLSG ENRSLRDELQ  300
RLSEECVKLT SENDSIKEEL TRLCGPDAIP KLENNGVTAH IQAKPDEGNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	268	274	RRSRLRK
2	268	275	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	1e-48	bZIP family protein