PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019173236.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

ERF

Protein Properties

Length: 263aa MW: 29695.9 Da PI: 6.1759

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019173236.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.2	3.6e-17	40	89	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 +++ GVr++ +grWvAeI+d + ++ r +lg++++aeeAa+a+++a+ l+ XP_019173236.1 40 KKFVGVRQRA-SGRWVAEIKDTT---QKIRMWLGTYDSAEEAARAYDEAAFLLR 89 589**999.7*****32...35********************8876 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MEIHFQQQHE DEIFSSLQKV TKSIESGWNK QRHGKNKGKK KFVGVRQRAS GRWVAEIKDT 60 TQKIRMWLGT YDSAEEAARA YDEAAFLLRA SRSTRTNFET IAPPDSDSPL ASRIRSLLSS 120 KKSSAKLQRI GQFSSSSSST TAATENQDTK ISSSDEALDF GYDDEIRESD HNTYKPDATS 180 SSMSLLQSWS FEQGLEFAQQ MIDIPNTEGE VIVGFSEFER MKVERSISAS LYAVHGVHEY 240 MQAMAINHPS QTQTLWDLPP FFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G19790.1	1e-17	ERF family protein