PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019173283.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 209aa MW: 24319.9 Da PI: 10.9369

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019173283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.1	6e-11	95	138	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 ++ rr+++NRe+ArrsR RK++ +e+L++ v L eN++L ++ XP_019173283.1 95 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRVENRELMNR 138 678999*********************************99866 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MSFDPFLSNP LPPFEGGFTS WDFPESAFDD FPQPVLSPVQ EPEPVISNSG SESDNSNSNP 60 TPAPANSNSG SDEPSRKRAR PISESGMDDP NQDERKRRRM ISNRESARRS RMRKQKHLEN 120 LRNQVNRLRV ENRELMNRFR FVSHHSHLVQ SDNERLRAES TLLRQRLWDI RQVLLVRQLQ 180 HQLSLSAWGF NNNNHNNNVE QRPQSLITR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	76	98	RKRARPISESGMDDPNQDERKRR
2	95	99	RKRRR
3	95	116	RKRRRMISNRESARRSRMRKQK
4	108	115	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37730.1	3e-24	bZIP family protein