PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019173377.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YA
Protein Properties Length: 151aa    MW: 16763.9 Da    PI: 10.8843
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019173377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA927.6e-2969122458
       CBFB_NFYA   4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ++VNaKQy++Il+RRq+Rakl ++++l  k+rkpy+h SRh hA++R RgsgGrF
  XP_019173377.1  69 IFVNAKQYHGILRRRQMRAKLVAQNRL-LKTRKPYMHGSRHLHAVNRVRGSGGRF 122
                     8**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MRPTFFVDNL EVSTHSSGQA TTIHSSYNCS DDDLNFNGLF TAYGPQPHVV GFSTARLPLP  60
FDLADDGLIF VNAKQYHGIL RRRQMRAKLV AQNRLLKTRK PYMHGSRHLH AVNRVRGSGG  120
RFLSSKKAQH HHHSPSSSPN SVDVSMSATA P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17590.23e-33NF-YA family protein