PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019173590.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

BES1

Protein Properties

Length: 261aa MW: 29307.4 Da PI: 8.9338

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019173590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	80.9	3.6e-25	17	73	18	74
DUF822 18 RERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgsk 74 ER RRa +a+++aGLR++ n++l ra++n+V +AL+reAG++ve+DGtty + XP_019173590.1 17 LERNRRAFTARMLAGLRQYSNFNLQPRAEMNKVTAALAREAGFTVEPDGTTYGSAAS 73 39**************************************************86554 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MSGNAASATA NKSRKFLERN RRAFTARMLA GLRQYSNFNL QPRAEMNKVT AALAREAGFT 60 VEPDGTTYGS AASSNVSGII NNFCQLVDPG GVKQELQLLK SLNIDVVVVN CWWGIVEGKE 120 DQKYKWSGYR ELFDIIRDKG LKLQVVIAFN AYGGNDFKVD IPLPQWVLKI GKDIPEIFFT 180 GRVGRWNTEC LSWGIDKECI LEHRTGREGC YEFMRSFRAE FNDLFTKGLI SAVEIGLGAF 240 GESKYPSFSE RNGWRFPGIV S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.2	6e-82	BES1 family protein