PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019173591.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 176aa MW: 20544.1 Da PI: 9.9526

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019173591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	92.1	4.5e-29	32	88	4	60
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++cprC+s++tkfCy+nny+++qPry+C +C+r+Wt+GG r++P+Gg k +k XP_019173591.1 32 PPRQCPRCHSNDTKFCYFNNYNMNQPRYYCWTCKRHWTHGGIQRDIPIGGKPHKGRK 88 5689**********************************************9888766 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MEQSNGVGDY RLPQPPPPRR LRTTEYHGSP PPPRQCPRCH SNDTKFCYFN NYNMNQPRYY 60 CWTCKRHWTH GGIQRDIPIG GKPHKGRKFT NRYENRRVQP SPHQLQPSCP RANVAPITLG 120 SLALPPTVTP YRVENEYLNM VNPLRTIEPP YNSSQNAFQP TTRDYGSRTQ NFFEQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45610.1	7e-24	Dof family protein