PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019173593.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 186aa MW: 21308.9 Da PI: 10.3035

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019173593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	89.9	2.1e-28	32	81	5	54
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGgg 54 ++ prC+s++tkfCy+nny+++qPry+C++C+r+Wt+GG r++P+Gg XP_019173593.1 32 PRQFPRCHSNDTKFCYFNNYNINQPRYYCRTCKRHWTHGGIQRDIPIGGK 81 5789********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MEQSNGVGDY HLPPPPPRRL RMTEYHGSPP PPRQFPRCHS NDTKFCYFNN YNINQPRYYC 60 RTCKRHWTHG GIQRDIPIGG KPHWGRKFTN RYENKRVQTS PPQLQPSRPP ANVAPVTFGP 120 LMIPPTVTPY RVENGYLNMV NPVRTIEPPY NSSQNAFQPT TRDYGSRTQN LFLNNNGGAS 180 SSNSIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66940.1	7e-22	Dof family protein