PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019173596.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 181aa MW: 21019 Da PI: 9.9737

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019173596.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	81.4	9.7e-26	31	87	4	60
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++cpr +s++tkfCy+ ny++ qPry+C++C+r+Wt+GG r++ +Gg k +k XP_019173596.1 31 PPRQCPRFHSNDTKFCYFKNYNMIQPRYYCRTCKRHWTHGGIQRDITIGGKPHKGRK 87 5689**********************************************9887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MEQGNGVGDY HPSLPVVRRL RTMEYLGSPP PPRQCPRFHS NDTKFCYFKN YNMIQPRYYC 60 RTCKRHWTHG GIQRDITIGG KPHKGRKFIN MYENRRVQPT PPQLQPSCPR ANVAPVTFGP 120 LALPSTVTPY RVENGSLNMV NPLRTIEPPY NSSQNSFQPT TRDYCSRILL FKDPEFLFEQ 180 Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45610.1	4e-20	Dof family protein