PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019173629.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NF-YB

Protein Properties

Length: 254aa MW: 27825.6 Da PI: 4.1314

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019173629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	43.7	6.7e-14	19	112	8	96
NF-YB 8 lPianvsrimkkvlPanak...is..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 lP + v r++k l + +k +s ++a + e + fi ++++ a+d c + kr+t+n++d++ al ++ f ++++pl++ l+++r+ +++ XP_019173629.1 19 LPKTIVRRLVKDKLSQLSKdgeMSllREAHQAFSESARIFIHYLSAAANDVCMESKRQTMNAEDVFKALDEIEFSEFIDPLRASLEEFRQKHSK 112 78888899999887765552223333799************************************************************97765 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MADDKEKGAA MPEVEVEDLP KTIVRRLVKD KLSQLSKDGE MSLLREAHQA FSESARIFIH 60 YLSAAANDVC MESKRQTMNA EDVFKALDEI EFSEFIDPLR ASLEEFRQKH SKRKAAASKS 120 VESNKKAKNE EKPAENGMSK KKQESTDNKK GKNTKPAVKE NGASKAQPVG SEEKDGEETN 180 ESEEDDVQEG NESGAEDGQE GNGSESEDEQ EGNGREAENG QEENGSEAED GQEGNGSEEE 240 DGQEDDESGD TADD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	1e-37	NF-YB family protein