PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019173689.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 257aa    MW: 29631.8 Da    PI: 6.3681
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019173689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM139.22.5e-4351352128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     +pGfrF Pt+eel+++yL++k+eg++ +++ vi+ ++i+++ePw+Lpk     +  +e+++w+fF++r++++a+g r+ r+t++gyWkatg+   
  XP_019173689.1   5 TPGFRFYPTEEELLSFYLHNKLEGTRQDINCVIPMINIFDLEPWHLPKvsgelC-VGETEQWFFFVPRQEREARGGRPCRTTAAGYWKATGSPSY 98 
                     69***************************888***************6456432.23677*********************************** PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     v+s++++++g+kk++vfykg++p g+kt+W m+eyr+
  XP_019173689.1  99 VYSSDNKVIGVKKSMVFYKGKSPCGRKTKWKMNEYRA 135
                     ***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MAEITPGFRF YPTEEELLSF YLHNKLEGTR QDINCVIPMI NIFDLEPWHL PKVSGELCVG  60
ETEQWFFFVP RQEREARGGR PCRTTAAGYW KATGSPSYVY SSDNKVIGVK KSMVFYKGKS  120
PCGRKTKWKM NEYRAIEEQL PSSHLHPSYS SPLIPSPKLR HEMTLCRVYV ILRNFGSFDR  180
RPIGNMGTSQ EEVKMIPMEA INKCSESSVV QEEEEEEDFD DGMNVYATTG LTRMVKSPEP  240
FSGLERLINF QLSKWNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.15e-77NAC family protein