PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019173781.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 241aa    MW: 26341.4 Da    PI: 7.3079
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019173781.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-19555155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr++  +g+Wv+eIr+p        kr++lg+f taeeAa+a+++a+  ++g
  XP_019173781.1  5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkKRIWLGTFETAEEAARAYDQAAVLMNG 55
                    59*****999.**********8.....335*********************977765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MVQSKKFRGV RQRQWGSWVS EIRHPLLKKR IWLGTFETAE EAARAYDQAA VLMNGQNAKT  60
NFPAAAVAKE KSNGNGGEAT PPIPVDVLSA KLKKCCREPA PSITCLRLDT DGCHIGVWQK  120
KSGKDSGSNW LTKIELQGKK KKKKKVCATE EEEEEEERQT PSSSTTDNNA GGGGGYCNSW  180
DNIVSPSSSS SLSSSNNSLG ISSSSPDELV IADMDDENRV AMQMVEELLN WNIPNSSIHQ  240
N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139145KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.19e-49ERF family protein