PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019173782.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 229aa    MW: 25156.1 Da    PI: 8.1182
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019173782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-19555155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr++  +g+Wv+eIr+p        kr++lg+f taeeAa+a+++a+  ++g
  XP_019173782.1  5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkKRIWLGTFETAEEAARAYDQAAVLMNG 55
                    59*****999.**********8.....335*********************977765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MVQSKKFRGV RQRQWGSWVS EIRHPLLKKR IWLGTFETAE EAARAYDQAA VLMNGQNAKT  60
NFPAAAVAKE KSNGNGGEAT PPIPVDVLSA KLKKCCREPA PSITCLRLDT DGCHIGVWQK  120
KSGKDSGSNW LTKIELQGKK KKKKKVCATE EEEEEEERQT PSSSTTDNNA GGGGGYCNSW  180
DNIVSPSSSS SLSSSNNSLA DMDDENRVAM QMVEELLNWN IPNSSIHQN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139145KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.15e-50ERF family protein