PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019174076.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 386aa MW: 43603.5 Da PI: 6.5955

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019174076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	311	345	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++e+ LA+ +gL+++q+ +WF N+R ++ XP_019174076.1 311 KWPYPSETEKVALAEATGLDQKQINNWFINQRKRH 345 669*****************************885 PP
2	ELK	35.9	1.6e-12	265	286	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL+sLkqE+s XP_019174076.1 265 ELKNHLLKKYSGYLSSLKQELS 286 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MENYGQLGEE TAAAARQRGS GSGFMYGGSV LGPPSYGRTG GGGESNHIAT GFHLQPGGGG 60 ECYGQSEGQP HTTVKSEGGS ASHHHHHHHQ MFQYPLMIRD HLHRQQESAG DDNSLTSEAD 120 AMKAKIIAHP QYSNLLEAYM DCQKVGAPPE VVARLSAVRQ ELEGKQRASF GSRDSSKDPE 180 LDQFMEAYYD MLMKYRDELT RPFQEAMEFM RRIESQLNML SDAPVRIFNS DDNKCEGVGS 240 SEEEQDNSGG DTELREIDPR VQDRELKNHL LKKYSGYLSS LKQELSKKKK KGKLPKDARQ 300 KLLSWWELHY KWPYPSETEK VALAEATGLD QKQINNWFIN QRKRHWKPSE DMQFMVMDGL 360 HHHQNAAAAL YMDGHYMGDA PYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MENYGQLGEE TAAAARQRGS GSGFMYGGSV LGPPSYGRTG GGGESNHIAT GFHLQPGGGG  60
ECYGQSEGQP HTTVKSEGGS ASHHHHHHHQ MFQYPLMIRD HLHRQQESAG DDNSLTSEAD  120
AMKAKIIAHP QYSNLLEAYM DCQKVGAPPE VVARLSAVRQ ELEGKQRASF GSRDSSKDPE  180
LDQFMEAYYD MLMKYRDELT RPFQEAMEFM RRIESQLNML SDAPVRIFNS DDNKCEGVGS  240
SEEEQDNSGG DTELREIDPR VQDRELKNHL LKKYSGYLSS LKQELSKKKK KGKLPKDARQ  300
KLLSWWELHY KWPYPSETEK VALAEATGLD QKQINNWFIN QRKRHWKPSE DMQFMVMDGL  360
HHHQNAAAAL YMDGHYMGDA PYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-134	TALE family protein