PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174113.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 444aa    MW: 47210.4 Da    PI: 7.913
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.3e-053173551255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_019174113.1 317 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 355
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MESAHLHNHH LHHQHHQQSF QDSPPPPPSS SSPSSSYGVS TSSTAQYSWT PNTTLLSGGA  60
GGGGLSSLYA NGVAAAGSIL SSRNHHHQVS VCNAPMAQDL SFHHWANAAA AGFGGGGGGS  120
GQTIKQELSS PDCYPRLADN MNTLDAKLLL GTLSGGGHQP AAAAHQFYCS STASSNTNTN  180
TNRGRFSQIY PTISVPSLNQ EASSSLANSS SLGMNLQALD LFNSATINGG FVHTSPDDHQ  240
HLGFHNFASF DHHHLQQSSQ RPFPSNVSSP SLFSHATVAI SADPKRPCNL VEPNPPQAPP  300
KKSRLDSRAS CPPFKVRKEK LGDRIAALQQ LVAPFGKTDT ASVLMEAIGY IKFLQNQVET  360
LSVPYMKLSR NKNSGRAMQG VNVCDIIYLQ GQEEIINIGS EEARRGLRSR GLCLVPLSCL  420
SYVTDSGGGV WPPPPSLEHF SPIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.18e-54bHLH family protein