PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019174140.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 372aa MW: 42197.2 Da PI: 7.9892

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019174140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.2	2.7e-11	85	115	4	34
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 +k++rr+++NReAAr+sR+RKka++++Le+ XP_019174140.1 85 DKAQRRLAQNREAARKSRLRKKAYVQQLETS 115 89**************************974 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MVSYQAMNIP STSQFAPTRM GLYEPFHPMR MWEETLRGDM IPSTGGCMVT QANERTDDNK 60 FDYKYNESAI PSPSGDNQAG KGLTDKAQRR LAQNREAARK SRLRKKAYVQ QLETSRLKLA 120 QLELELEKAR QQGICMFGAS SSIGLCATLN PGIAAFELDY TNWIEEHQKK TSELRNILQA 180 PTNDMELEVL VQSVLSHYCD LFRMKVEVAK ADVFYLISGA WRTPVERFYL WIGGFRPSEM 240 IKVVLPQLGQ LSEQQRLNVN NLRHCCQQAE DALTQGMDKL QQTLSQNMTL ITTGAGTYST 300 QMASAIEKLE ALESFVNQAD HLRQQTLLQM SRILTTHQAA RGLLAFGEYF QRLRSLSSLW 360 AARPRETTLD CC

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MVSYQAMNIP STSQFAPTRM GLYEPFHPMR MWEETLRGDM IPSTGGCMVT QANERTDDNK  60
FDYKYNESAI PSPSGDNQAG KGLTDKAQRR LAQNREAARK SRLRKKAYVQ QLETSRLKLA  120
QLELELEKAR QQGICMFGAS SSIGLCATLN PGIAAFELDY TNWIEEHQKK TSELRNILQA  180
PTNDMELEVL VQSVLSHYCD LFRMKVEVAK ADVFYLISGA WRTPVERFYL WIGGFRPSEM  240
IKVVLPQLGQ LSEQQRLNVN NLRHCCQQAE DALTQGMDKL QQTLSQNMTL ITTGAGTYST  300
QMASAIEKLE ALESFVNQAD HLRQQTLLQM SRILTTHQAA RGLLAFGEYF QRLRSLSSLW  360
AARPRETTLD CC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-127	bZIP family protein