PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174170.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 246aa    MW: 27357.3 Da    PI: 7.1528
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.91.8e-3157113259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     +++rYkeClkNhA+ +G havDGCgEfmp+ geeg+ ++lkCaAC+CHRnFHR+e e+
  XP_019174170.1  57 TNYRYKECLKNHAVGIGRHAVDGCGEFMPA-GEEGSLDGLKCAACNCHRNFHRKEAES 113
                     5789*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MEMEMEFDEE REEEMEMEDM EEAGNYQTPA GRGMEGAPAG GVGRKSGGGS AAANTTTNYR  60
YKECLKNHAV GIGRHAVDGC GEFMPAGEEG SLDGLKCAAC NCHRNFHRKE AESEGYARHQ  120
SPHHHLHPLH HHFSTFSSYR SPHPSGYLHV TPPTQHRPLA LPSSSRDEED MSNPSSSGGG  180
GSKKRFRTKF TAEQKDKMLA LAERLGWRIQ KQDEAAVQQF CAEANVKSHV FKVWMHNNKH  240
TLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.14e-70ZF-HD family protein