PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174249.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 138aa    MW: 15432.3 Da    PI: 7.671
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174249.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.3e-172265148
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                    ++y GVr+++ +gr++AeIr p++   + r++lg+f+taeeAa a++ 
  XP_019174249.1 22 TKYLGVRRRP-WGRYAAEIRNPYT---KERHWLGTFDTAEEAALAYDL 65
                    699*******.**********865...5******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
METSMNPLGM RKHGRRSSRH STKYLGVRRR PWGRYAAEIR NPYTKERHWL GTFDTAEEAA  60
LAYDLSSIAF SGIQNAPTNF VYTVDHSSCF PSPSPPPPPP PQPSTAELDE IVDDESLVIA  120
SILQSFRQSN GTDNKLLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.14e-30ERF family protein