PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174333.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 177aa    MW: 19426.4 Da    PI: 4.8785
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB157.71.9e-4920115297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     ++q+ +lPianv+rimk+ lP+nakisk+aket+qec+sefi+fvt+easdkc+re+rkt+ngdd++wal+tlGf+d+v plk yl+ +re eg+
  XP_019174333.1  20 QDQQLLLPIANVGRIMKQRLPQNAKISKEAKETMQECASEFIGFVTGEASDKCRRERRKTVNGDDICWALGTLGFDDFVGPLKRYLHIFREQEGD 114
                     5677899**************************************************************************************99 PP

           NF-YB  97 k 97 
                     +
  XP_019174333.1 115 Q 115
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MAENWGAGGS NDEGGSRAEQ DQQLLLPIAN VGRIMKQRLP QNAKISKEAK ETMQECASEF  60
IGFVTGEASD KCRRERRKTV NGDDICWALG TLGFDDFVGP LKRYLHIFRE QEGDQRSVQL  120
NNNEDSMMED HHPPPLHSPS SSSGQPSTTP APRGEALPPF PAPYFFNSAS YGGDSQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.18e-50NF-YB family protein