PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174337.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WOX
Protein Properties Length: 226aa    MW: 25423 Da    PI: 9.8716
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174337.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.51.7e-2187146357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eq+ +Le l++   r+p+a+++e+++++l    +++ ++V++WFqN++a+e++
  XP_019174337.1  87 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITAQLskygKIEGKNVFYWFQNHKARERQ 146
                     7*****************99**************************************97 PP
2Wus_type_Homeobox119.71.2e-3887148465
  Wus_type_Homeobox   4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L++yGkie+kNVfyWFQN+kaRerqkq
     XP_019174337.1  87 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQ 148
                        8***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MKVHQFGRSG LMFDHDNAAT SLSLGCKRLR PLAPKLAVDG GAITISPPVF DLKSFIRPES  60
SSPTKLGSPE TKKDSPPAAV ETHPGGTRWN PTQEQIGILE MLYRGGMRTP NAQQIEQITA  120
QLSKYGKIEG KNVFYWFQNH KARERQKQKR NTALLAAGGG LNHTPTTPPP TLPFDLIVEE  180
ESPKKRRCRS WAYEFLEMEE KRSSCCRREE GDRTLELFPL HPELGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.19e-73WOX family protein