PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174765.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 153aa    MW: 17137.2 Da    PI: 10.0035
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174765.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.81e-162372255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+G+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a   l+g
  XP_019174765.1 23 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFHLRG 72
                    69*****99.**********9...336**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MEGSGRAAAE KRKHSRQSQQ EKPYRGIRMR KWGKWVAEIR EPNKRSRIWL GSYSSPVAAA  60
RAYDTAVFHL RGPSARLNFP ECIAPHDDQL RDLSAADIRK KATEVGARVD ALQAALHASS  120
AEPTSPSLNQ NRVVLFKPDL NEYPTPDSSE EDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.14e-50ERF family protein