PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174840.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 89aa    MW: 10629 Da    PI: 9.4677
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174840.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.4e-08345344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+   +++ +a + + ++   +W++Iar++g  ++ ++++  +
   XP_019174840.1  3 SWTAKQNKKFEEALAIYDKEtpdRWHKIARYVG--KSIEEVRRQY 45
                     6*****************99************8..8999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MASWTAKQNK KFEEALAIYD KETPDRWHKI ARYVGKSIEE VRRQYEILEK DIMQIENDEV  60
PLPNYRATES SSRGFASNEQ RLLRNLKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.21e-32MYB_related family protein