PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174983.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 231aa    MW: 26257.2 Da    PI: 10.1893
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.71.1e-18127214196
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+  ++ps+v+   +l lp  f++++   ++++ t+tl desg +W   +  rk++    l++GWk+F+ +++L +gD +vF+l++r  f  +v 
  XP_019174983.1 127 FVRSMLPSHVSGGFWLGLPSYFCRRNL--PARDETVTLIDESGAEWPTVYLARKTG----LSGGWKKFAVDHDLVDGDALVFQLIKRAVF--KVY 213
                     778899*****************9995..456779***************656665....*************************98888..554 PP

                     E CS
              B3  96 v 96 
                     +
  XP_019174983.1 214 I 214
                     4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MVMSKVKYEE LRQQRVEENK RRLEELHLPL LSLALKNASP KPSPMKKVKP RVIRTELVPL  60
RRSPRVAKSA APEYAEVTYY ERILPRRASC PRRDLSNRVY ASDKDRAVAT VKAEKLEASL  120
ESKVPTFVRS MLPSHVSGGF WLGLPSYFCR RNLPARDETV TLIDESGAEW PTVYLARKTG  180
LSGGWKKFAV DHDLVDGDAL VFQLIKRAVF KVYITRLNNL ADDDGSETSN D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-57B3 family protein