PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019174985.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Protein Properties

Length: 199aa MW: 22597.8 Da PI: 9.5425

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019174985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.1	7.6e-19	95	182	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+ ++ps+v+ +l lp f++++ ++++ t+tl desg +W + rk++ l++GWk+F+ +++L +gD +vF+l++r f +v XP_019174985.1 95 FVRSMLPSHVSGGFWLGLPSYFCRRNL--PARDETVTLIDESGAEWPTVYLARKTG----LSGGWKKFAVDHDLVDGDALVFQLIKRAVF--KVY 181 778899***************9995..456779***********656665....***********************98888..554 PP E CS B3 96 v 96 + XP_019174985.1 182 I 182 4 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MVMSKVKYEE LRQQRVEENK RRLEELHLPL LSLALKNASP KPSPVTYYER ILPRRASCPR 60 RDLSNRVYAS DKDRAVATVK AEKLEASLES KVPTFVRSML PSHVSGGFWL GLPSYFCRRN 120 LPARDETVTL IDESGAEWPT VYLARKTGLS GGWKKFAVDH DLVDGDALVF QLIKRAVFKV 180 YITRLNNLAD DDGSETSND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	6e-57	B3 family protein