PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019175001.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 218aa MW: 24675.6 Da PI: 7.36

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019175001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.4	3.5e-29	131	189	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk++ +pr+YY+C+s gC+vkkkver+++d k++++tYeg Hnhe XP_019175001.1 131 LDDGYKWRKYGKKKVKSNSYPRNYYKCSSGGCKVKKKVERDQDDAKYLITTYEGVHNHE 189 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MSAPTFLEPN PNLNFTAPFS SNIIPDYDYC YQDLDLFCAD DDHNLFSDDF TSSNDNTFGY 60 PSSDLSQTTP VVLPEKSNNS TTGSSSCSSD GMPMNTNYMP VMKCKREMKK GPKMKEKHAI 120 AFRTRTDLEV LDDGYKWRKY GKKKVKSNSY PRNYYKCSSG GCKVKKKVER DQDDAKYLIT 180 TYEGVHNHEN LYVIYYQGMP ATLASNGLSL PPASLQPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	3e-18	WRKY family protein