PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019175002.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 217aa    MW: 24544.4 Da    PI: 7.36
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019175002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.43.5e-29130188159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYG+K+vk++ +pr+YY+C+s gC+vkkkver+++d k++++tYeg Hnhe
  XP_019175002.1 130 LDDGYKWRKYGKKKVKSNSYPRNYYKCSSGGCKVKKKVERDQDDAKYLITTYEGVHNHE 188
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MSAPTFLEPN PNLNFTAPFS SNIIPDYDYC YQDLDLFCAD DDHNLFSDDF TSSNDNTFGY  60
PSSDLSQTTP VVLPEKSNNS TTGSSSCSSD GMPMNTNYMP VKCKREMKKG PKMKEKHAIA  120
FRTRTDLEVL DDGYKWRKYG KKKVKSNSYP RNYYKCSSGG CKVKKKVERD QDDAKYLITT  180
YEGVHNHENL YVIYYQGMPA TLASNGLSLP PASLQPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.13e-18WRKY family protein