PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019175094.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 233aa MW: 23996.6 Da PI: 8.0439

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019175094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.7	1.3e-38	24	82	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lrnvPvGgg+rk+ ++ XP_019175094.1 24 PENLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGTLRNVPVGGGTRKQPSN 82 57899**************************************************9775 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MSSDSGERRP GRMTGTAGQK STEPENLPCP RCDSTNTKFC YYNNYNLSQP RHFCKSCRRY 60 WTRGGTLRNV PVGGGTRKQP SNKRPRTNTL AASSPPDMPP REPFHSAGSG CEVNLNEAVP 120 DPGTASFTSL LGSPVGGDGA GFMSLGGFGL GLGDAGMHGF GFGLGMVDWP AETVGAAPSG 180 NVNGGGPTVG GPVGSSSCNT WQMGGGLVDG TLGDGGDYFG WPDLAISAPG RRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-36	Dof family protein