PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019175205.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 106aa    MW: 11736 Da    PI: 8.8545
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019175205.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding292.5e-09651346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+   +++ +a + + ++   +W+  ar +g g+t++++k ++ +
   XP_019175205.1  6 AWTAKQNKRFENALAVYDKDtpdRWRNLARAVG-GKTEEEVKRHYEM 51
                     8********************************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MASSSAWTAK QNKRFENALA VYDKDTPDRW RNLARAVGGK TEEEVKRHYE MLVEDINHIE  60
SGKVPLPNYD AHAAGAGAAN GSSSSSSSSS YALMQQEKKL QYMKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.15e-35MYB_related family protein